Publications

This is our catalog of publications authored by IBM researchers, in collaboration with the global research community. It’s an ever-growing body of work that shows why IBM is one of the most important contributors to modern computing.

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243 results for Ruhong Zhou

A wavelet approach for the analysis of folding trajectory of protein Trp-cage
- - Lei Ye
  - Huajun Chen
  - et al.
- 2005
- Journal of Bioinformatics and Computational Biology
Hydration and dewetting near graphite-CH ₃ and graphite-COOH plates
- - Jingyuan Li
  - Ting Liu
  - et al.
- 2005
- Journal of Physical Chemistry B
Drying and hydrophobic collapse of paraffin plates
- - Xuhui Huang
  - Ruhong Zhou
  - et al.
- 2005
- Journal of Physical Chemistry B
Comment on "can a continuum solvent model reproduce the free energy landscape of a β-hairpin folding in water?" The Poisson-Boltzmann equation
- - Ruhong Zhou
  - Goran Krilov
  - et al.
- 2004
- Journal of Physical Chemistry B
Exploring the protein folding free energy landscape: Coupling replica exchange method with P3ME/RESPA algorithm
- - Ruhong Zhou
- 2004
- Journal of Molecular Graphics and Modelling
Describing protein folding kinetics by molecular dynamics simulations. 2. Example applications to alanine dipeptide and a β-hairpin peptide
- - William C. Swope
  - Jed W. Pitera
  - et al.
- 2004
- Journal of Physical Chemistry B
Free energy landscape of protein folding in water: Explicit vs. implicit solvent
- - Ruhong Zhou
- 2003
- Proteins: Structure, Function and Genetics
Spatial profiling of protein hydrophobicity: Native vs. decoy structures
- - Ruhong Zhou
  - B. David Silverman
  - et al.
- 2003
- Proteins: Structure, Function and Genetics
Blue Matter, an application framework for molecular simulation on Blue Gene
- - B.G. Fitch
  - R.S. Germain
  - et al.
- 2003
- Journal of Parallel and Distributed Computing
Detecting native protein folds among large decoy sets with hydrophobic moment profiling.
- - Ruhong Zhou
  - B David Silverman
- 2002
- Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing