Publications

1512 results for Machine Learning

ZeroNER: Fueling Zero-Shot Named Entity Recognition via Entity Type Descriptions
- - Alessio Cocchieri
  - Marcos Martínez Galindo
  - et al.
- 2025
- ACL 2025
The ShareLM Collection and Plugin: Contributing Human-Model Chats for the Benefit of the Community
- - Shachar Don-Yehiya
  - Leshem Choshen
  - et al.
- 2025
- ACL 2025
AutoPeptideML 2: An open source library for democratizing machine learning for peptide bioactivity prediction
- - Raúl Fernández Díaz
  - Lam Thanh Hoang
  - et al.
- 2025
- ISMB 2025
Improving Transcriptomic Foundation Models Through Gene-Level Error Analysis and Adaptive Masking
- - Michael Morris Danziger
  - Bharath Dandala
  - et al.
- 2025
- ISMB 2025
DOES YOUR MODEL UNDERSTAND GENES? A MODALITY-AGNOSTIC BENCHMARK OF GENE PROPERTIES
- - Yoav Kan-Tor
  - Michael Morris Danziger
  - et al.
- 2025
- ISMB 2025
Agentic AI for bioinformatics workflows
- - Jennifer Kelly
  - Ashley Evans
  - et al.
- 2025
- ISMB 2025
BioVERSE: A Modular Framework for Integrating Biomedical Modalities with Language Models in Precision Medicine
- - Ching-Huei Tsou
  - Michal Ozery-Flato
  - et al.
- 2025
- ISMB 2025
Transcriptomic Foundation Model Evaluation: Quantifying Expression Level Discrimination Through Null Sample Testing
- - Noa Moriel
  - Michael Morris Danziger
  - et al.
- 2025
- ISMB 2025
Harnessing biomedical foundation models for genomic feature engineering to investigate patient drug response
- - Laura Gardiner
  - Stephen Checkley
  - et al.
- 2025
- ISMB 2025
Understanding Mode Connectivity via Parameter Space Symmetry
- - Bo Zhao
  - Nima Dehmamy
  - et al.
- 2025
- ICML 2025